Allegrograph is a triplestore database used in the INNUENDO Platform to store relationships between everything, from strains in projects to the processes that are run on those strains in a specific project.

Currently it uses an unpaid version with store to about 1 million triples. If required, a paid version can be obtained to obtain more storage.


Install some general dependencies.

sudo apt-get update
sudo apt-get install -y git python-pip libpq-dev libcurl4-openssl-dev python-dev libsasl2-dev libldap2-dev libssl-dev wget

Get Allegrograph server installer from the INNUENDO releases.

# Create a directory to store the files
mkdir allegrograph

# Enter the directory
cd allegrograph

# Download the server files

Uncompress the downloaded files.

tar zxf agraph-6.0.2-linuxamd64.64.tar.gz

Install the Allegrograph server in an non-interactive way. You can change the file locations and username by changing the inputs in the directives.

agraph-6.0.2/install-agraph ./agraph --non-interactive \
    --config-file "./agraph/lib/agraph.cfg" \
    --data-dir "./agraph/data" \
    --log-dir "./agraph/log" \
    --pid-file "./agraph/data/" \
    --runas-user "innuendo" \
    --create-runas-user \
    --port 10035 \
    --super-user "innuendo" \
    --super-password "innuendo_allegro"

Launch the allegrograph server. It needs to be running for the Frontend server and the Controller to work.

./agraph/bin/agraph-control --config /Allegrograph/agraph/lib/agraph.cfg start